Links
The Molecular Genetics Web Site hosts a database of 347 links to web sites.
Below are the 10 most frequently used over the last 8 weeks and the 5 most recently added links.
Most used links
| Koninklijke Vlaamse Academie van België voor Wetenschappen en Kunsten - KVAB (234 hits) |
| De Academie is een onafhankelijk instituut dat wetenschap en kunst stimuleert door het organiseren van wetenschappelijke en culturele activiteiten, het oprichten van nationale comités, vertegenwoordiging in internationale organisaties en fora, het aantrekken van buitenlandse professoren, en het formuleren van adviezen aan de regering. http://www.kvab.be |
| Gordon Research Conferences (187 hits) |
| The Gordon Research Conferences provide an international forum for the presentation and discussion of frontier research in the biological, chemical, and physical sciences, and their related technologies. http://www.grc.uri.edu/ |
| European Collaborative Interspecific Mouse Backcross database (EUCIB) (160 hits) |
| The Mouse Backcross Database (MBx) was written to hold experimental data derived from the EUCIB project. Searches are done on copies of the database files which are updated overnight. The data is displayed in a similar format to the retrieval forms of the Sybase version of the database. Some of the data has restricted access. http://www.mgu.har.mrc.ac.uk/servlet/EUCIB.mapViewer |
| modENCODE (63 hits) |
| The National Human Genome Research Institute (NHGRI) model organism ENCyclopedia Of DNA Elements (modENCODE) Project will try to identify all of the sequence-based functional elements in the Caenorhabditis elegans and Drosophila melanogaster genomes. . http://www.modencode.org |
| InsulatorDB (61 hits) |
| Insulators, with the functions of enhancer-blocking and domain-bordering, are critical regulatory elements for gene expression control and represent a class of diverged DNA sequences capable of shielding genes against inappropriate cis-regulatory signals from their genomic neighborhood. To analyze this important type of DNA regulatory elements, we created a CTCF binding site database (CTCFBSDB), a comprehensive collection of experimentally determined and computationally predicted CTCF binding sites (CTCFBS) from the literature. The database is designed to facilitate the studies on insulators and their roles in demarcating functional genomic domains. http://insulatordb.uthsc.edu |
| ALS Forum (60 hits) |
| ALS Forum is the gateway to a collection of some of the most important and valuable ALS-related resources targeted specifically towards both academic and industry-based researchers.. http://www.researchals.org/page/ |
| GenScan (55 hits) |
| This server provides access to the program Genscan for predicting the locations and exon-intron structures of genes in genomic sequences from a variety of organisms. http://genes.mit.edu/GENSCAN.html |
| SIFT - Sorting Intolerant From Tolerant (55 hits) |
| SIFT will return predictions for what amino acid substitutions will affect protein function. http://sift.jcvi.org |
| Cambridge School of Biological Sciences (54 hits) |
| School of Biological Sciences at the University of Cambridge. http://www.bio.cam.ac.uk/ |
| UIA - Helpdesk (53 hits) |
| Teneinde tegemoet te kunnen komen aan de steeds grotere behoefte aan gebruikers- ondersteuning op de UIA, is er beslist om een helpdesk op te richten. http://www.ua.ac.be/main.aspx?c=*DEPICT&n=18057 |
Most recent links
| NGS Catalog (April 24, 2012) |
| a continually updated database that collects, curates and manages available human Next Generation Sequencing (NGS) data obtained from published literature. http://bioinfo.mc.vanderbilt.edu/NGS |
| Exome Variant Server (February 20, 2012) |
| The goal of the NHLBI GO Exome Sequencing Project (ESP) is to discover novel genes and mechanisms contributing to heart, lung and blood disorders by pioneering the application of next-generation sequencing of the protein coding regions of the human genome across diverse, richly-phenotyped populations and to share these datasets and findings with the scientific community to extend and enrich the diagnosis, management and treatment of heart, lung and blood disorders.. http://evs.gs.washington.edu/EVS |
| InsulatorDB (June 17, 2011) |
| Insulators, with the functions of enhancer-blocking and domain-bordering, are critical regulatory elements for gene expression control and represent a class of diverged DNA sequences capable of shielding genes against inappropriate cis-regulatory signals from their genomic neighborhood. To analyze this important type of DNA regulatory elements, we created a CTCF binding site database (CTCFBSDB), a comprehensive collection of experimentally determined and computationally predicted CTCF binding sites (CTCFBS) from the literature. The database is designed to facilitate the studies on insulators and their roles in demarcating functional genomic domains. http://insulatordb.uthsc.edu |
| PheGenI (NCBI) (April 20, 2011) |
| Phenotype Genotype Integrator (PheGenI) permits researchers to view a tabular display of genome-wide association study results for DNA sequence variations, genes and gene expression differences for a given trait. The results are linked to their source databases where researchers can then dig deeper into the detailed data. PheGenI also includes graphical displays by chromosome (ideogram) and a DNA sequence viewer that shows the relationships between genetic variants in the human genome at the nucleotide level. http://www.ncbi.nlm.nih.gov/gap/PheGenI |
| ToppGene Suite (April 13, 2011) |
| A one-stop portal for gene list enrichment analysis and candidate gene prioritization based on functional annotations and protein interactions network. http://toppgene.cchmc.org |
All Molgen links
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| ADE-4 on the Web ADE-4 is a multivariate analysis and graphical display software package for Macintosh and micro-computers running the Windows 95 and Windows NT systems. http://pbil.univ-lyon1.fr/ADE-4/ |
| AGEA - Anatomic Gene Expression Atlas Anatomic Gene Expression Atlas (AGEA) of the adult C57Bl/6J mouse brain, created from more than 4,000 gene expression profiles from in situ hybridization data from the Allen Brain Atlas. The AGEA allows users to explore three-dimensional gene expressionbased correlation and clustering maps of the brain, and a search tool allows users to retrieve lists of enriched genes at points of interest.. http://mouse.brain-map.org/agea |
| Allen Brain Atlas The Allen Brain Atlas (ABA) is an interactive, genome-wide image database of gene expression in the mouse brain. A combination of RNA in situ hybridization data, detailed Reference Atlases and informatics analysis tools are integrated to provide a searchable digital atlas of gene expression. Together, these resources present a comprehensive online platform for exploration of the brain at the cellular and molecular level.. http://www.brain-map.org |
| ALS Forum ALS Forum is the gateway to a collection of some of the most important and valuable ALS-related resources targeted specifically towards both academic and industry-based researchers.. http://www.researchals.org/page/ |
| Altavista ... http://www.altavista.com/ |
| AlzGenes Database This database is aimed at providing an unbiased, centralized, publicly available and regularly updated collection of genetic association studies performed on AD phenotypes. http://www.alzforum.org/res/com/gen/alzgene |
| Alzheimer Disease and Frontotemporal Dementia Mutation Database The ADMDB aims at offering the scientific community useful and relevant information on AD mutations. http://www.molgen.ua.ac.be/ADMutations/ |
| Alzheimer Research Forum The Alzheimer Research Forum is a non-profit foundation which has established this web site to serve the scientific and clinical research community. http://www.alzforum.org/ |
| Alzheimer's Association USA The Alzheimer's Association is your source for information, support and assistance on issues related to Alzheimer's disease. Online submission site voor research grants. http://www.alz.org |
| AlzRisk The AlzRisk database aims to provide a comprehensive, unbiased, centralized, publicly available and regularly updated collection of epidemiologic reports that evaluate environmental (i.e., non-genetic) risk factors for Alzheimer disease (AD) in well-defined study cohorts. http://www.alzforum.org/res/com/alzrisk |
| Amedeo AMEDEO, the medical literature guide, has been created to serve the needs of healthcare professionals, including physicians, nurses, pharmacists, administrators, other members of the health professions, and patients and their friends. They can easily access timely, relevant information within their respective fields. AMEDEOs core components include weekly emails with bibliographic lists about new scientific publications, personal Web pages for one-time download of available abstracts (see example), and an overview of the medical literature published in relevant journals over the past 12 to 24 months . http://www.amedeo.com/ |
| American Academy of Neurology (AAN) The American Academy of Neurology is a medical specialty society established to advance the art and science of neurology, and thereby promote the best possible care for patients with neurological disorders.. http://www.aan.com/ |
| American Association for the Advancement of Science (AAAS) The American Association for the Advancement of Science (AAAS, pronounced 'Triple-A-S') is a nonprofit professional society dedicated to the advancement of scientific and technological excellence across all disciplines, and to the public's understanding of science and technology. AAAS is among the oldest societies in America, having been founded in Philadelphia in 1848. Many of today's most prestigious and influential scientific societies have their historical origins in AAAS. http://www.aaas.org/ |
| American Board of Genetic Counseling (ABGC) The American Board of Genetic Counseling prepares and administers examinations to certify individuals who provide services in the medical genetics specialty of genetic counseling and accredits training programs in the field of genetic counseling. http://www.faseb.org/genetics/abgc/abgcmenu.htm |
| American Board of Medical Genetics (ABMG) The American Board of Medical Genetics certifies individuals and accredits training programs in the field of human genetics. http://www.faseb.org/genetics/abmg/abmgmenu.htm |
| American College of Medical Genetics Foundation The American College of Medical Genetics Foundation (the Foundation) is organized exclusively for charitable, scientific, and educational purposes. More specifically, the Foundation is organized exclusively to stimulate and support research, education, and knowledge in the field of medical genetics with the overall objective of advancing the art and science of medical genetics, fulfilling the medical genetic needs of the public, and, thereby, improving the public health. http://www.faseb.org/genetics/acmg/acmgmenu.htm |
| American Health Assistance Foundation The American Health Assistance Foundation (AHAF) is a registered 501(c)(3) nonprofit charitable organization that has dedicated over 25 years to funding research on age-related and degenerative diseases, educating the public about these diseases, and providing emergency financial assistance to Alzheimer's disease patients and their caregivers. http://www.ahaf.org/ |
| American Society of Human Genetics The American Society of Human Genetics. http://www.faseb.org/genetics/ashg/ashgmenu.htm |
| American Type Culture Collection (ATCC) The American Type Culture Collection (ATCC) is a global nonprofit bioresource center that provides biological products, technical services, and educational programs to private industry, government, and academic organizations around the world. Their mission is to acquire, authenticate, preserve, develop, and distribute biological materials, information, technology, intellectual property, and standards for the advancement, validation, and application of scientific knowledge. http://www.lgcpromochem-atcc.com/ |
| Amersham Pharmacia Biotech - Belgium Our biotechnology systems, (instruments, reagents and software) products and services are used in gene and protein research, drug discovery and development, and biopharmaceutical manufacturing. http://www4.amershambiosciences.com/aptrix/upp01077.nsf/content/belgium_homepage |
| AMNESI The Domain Name Search Engine. Database consists of almost all DNS entries and it is huge. We are using several different methods to collect names including bot, scanner and crystal ball. http://www.amnesi.com |
| Animal Genome Database Japanese Animal Genome Database. http://ws4.niai.affrc.go.jp/ |
| Antwerp Theoretical Neurobiology (BBF) The Theoretical Neurobiology unit is part of the Born-Bunge Foundation, a research institute affiliated with the University of Antwerp - UIA (Belgium). They study cerebellar function using realistic models of neurons and neural networks combined with electrophysiological and functional imaging studies in rats. They also develop neural simulation software. http://www.tnb.ua.ac.be/BBF/ |
| Applied Biosystems Systems for genetics analysis, PCR DNA and PNA synthesis, molecular diagnostics and microbial identification. http://www.appliedbiosystems.com/ |
| Arlequin Arlequin is an exploratory population genetics software environment able to handle large samples of molecular data (RFLPs, DNA sequences, microsatellites), while retaining the capacity of analyzing conventional genetic data . http://lgb.unige.ch/arlequin/ |
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| B&L Systems Belgium B&L Systems (Biotechnology & Life Sciences) is an up-front technology supplier of products for biotechnology and life sciences and has been ISO 9001: 2000 registered. The company based in Maarssen, the Netherlands, provides a wide range of instruments, reagents and consumables in the areas of cell biology, molecular biology and biochemistry. http://www.blsystems.nl |
| BACPAC Resources This is a World Wide Website run by the BACPAC Resource Center at the Children's Hospital Oakland Research Institute in Oakland, Ca., USA. BACPAC Resources is the distribution arm of our academic laboratory, operating on a cost-recovery mechanism in order to make the resources generated in our laboratory available to the academic scientific community. http://bacpac.chori.org/ |
| Basic Nomenclature For Cytogenetics General guidelines and basic nomenclature for cytogenetics. http://www.slh.wisc.edu/cytogenetics/abnormalities/nomenclature.php |
| Baylor College of Medicine (BCM) The mission of Baylor College of Medicine is to promote health for all people through education, research, and public service. The College pursues this mission by sustaining excellence in educating medical and graduate students, primary care and specialty physicians, biomedical scientists and allied health professionals; by advancing basic and clinical biomedical research; by fostering public awareness of health and the prevention of disease; and by promoting patient care of the highest standard. http://www.bcm.tmc.edu/ |
| BCM Search Launcher The Baylor College of Medicine Search Launcher is an on-going project to organize molecular biology-related search and analysis services available on the WWW by function by providing a single point-of-entry for related searches (e.g., a single page for launching protein sequence searches using standard parameters). http://searchlauncher.bcm.tmc.edu/ |
| BD Biosciences BD Biosciences provides tools to study life - from normal processes to disease states. With our tools, clinicians and researchers find solutions, gaining a better understanding of disease, improving diagnosis and disease management, and facilitating the discovery and development of new drugs. http://www.bdbiosciences.com |
| Belgian BioIndustries Association The Belgian BioIndustries Association (BBA) is a non-profit organisation bringing together biotechnological forces and expertise in Belgium to promote biotechnology development and actively represent and support its members in Belgium and abroad. http://www.bba-bio.be/ |
| Belgian EMBNET Node (BEN) Informatic Support for the Belgian Scientific Researchers in Molecular Biology, Biotechnology and Biomedical Sciences. http://www.be.embnet.org/ |
| Belgian Institute of postal services and telecommunication Latest virus warnings reported on belnet. http://www.bipt.be/ |
| Belgian Society for Human Genetics (BeSHG) The BeSHG is aimed at promoting Human Genetics in its wider sense, a.o. by supporting genetic research, improving exchanges between Belgium and foreign countries, organising scientific meetings, and enhancing collaboration between Belgian labs. http://www.beshg.be |
| Belgian White Pages - InfoBel A free of charge use of the entire Infobel Database on the world wide web. Probably the most visited site in Belgium. Infobel.be has been once nominated as best Belgian site by IT WINNERS of BI TECHNOLOGY and twice nominated at the Best European Award Contest organised by the European Community. http://www.infobel.be |
| Belgian White Pages - Skynet Belgacom's White Pages. http://www.skynet.be/index.html?or=sea&l1=search&l2=whitepages |
| Belgian Yellow pages - Promedia Belgian Yellow pages. http://www.goudengids.be/ |
| BETULA Project This project is a prospective study on aging, memory, and dementia that will run in Umeå, Sweden, for 15 years. http://www.psy.umu.se/memory/Betula.html |
| BIDS BIDS is the best known and most widely used bibliographic service for the academic community in the UK. It provides, on a not-for-profit basis, the highest possible level of service to allow UK Academic institutions and their members access to bibliographic data, scholarly publications and research data. http://www.bids.ac.uk/ |
| Biocatalog The Biocatalog is a software directory of general interest in molecular biology and genetics. Another project the DBcat at Infobiogen (the French EMBnet node) lists the databases in this domain. We have sometimes imported information from existing lists and ftp sites. http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-page+query+-libList+BIOCATAL |
| BioComputing Hypertext Coursebook The tutorial texts have been developed for the award-winning VSNS-BCD BioComputing Courses, aimed at a mixed audience of biologists, computer scientists, and students + researchers of related areas, on a late undergraduate / graduate level. http://www.techfak.uni-bielefeld.de/bcd/Curric/ |
| BioMedNet BioMedNet is the website for biological medical researchers. BioMedNet is owned by Elsevier Science and is part of the Reed Elsevier group of companies.. http://www.bmn.com/ |
| BioSample.com BioSample.com is an innovative Internet e-commerce exchange, that gathers and manages the world's largest inventory of blood, tissue and other samples for the biomedical research community and pharmaceutical industries worldwide. http://www.biosample.com/ |
| BioText Search Engine The BioText Search Engine is a freely available Web-based application that provides biologists with new ways to access the scientific literature. http://biosearch.berkeley.edu |
| BIOzym The BIOzym Group is made-up of four companies in one holding structure, each company is specialized in a specific area, such as development, production, and offering products and services for molecular biology. BIOzymTC Molecular Biology Trading & Marketing. GENOtronics Hardware & Software Research & Development. BIOplastics Injection Moulding and Acrylics Production & Design. CYCLERtest PCR Temperature & Measurement Services. http://www.biozymgroup.com |
| Blackwell Science International publishers in science, medicine and technology. Incorporates Synergy online journals. http://www.blackwellpublishing.com/subject_top_sci.asp?subj=V |
| BLAST (NCBI) NCBI's sequence similarity search tool designed to support analysis of nucleotide and protein databases. http://www.ncbi.nlm.nih.gov/BLAST |
| Born-Bunge Foundation (BBF) The Born-Bunge Foundation was founded in Antwerp starting as the Bunge Institute. It's development is due to the combined efforts of different families, expert administrators and of a very exceptional man, Dr. Ludo van Bogaert who inspired the endeavour. http://www.tnb.ua.ac.be/BBF/BBF_index.html |
| BROAD Institute The Broad Institute is a research collaboration of MIT, Harvard ans its affiliated Hospitals, and the Whitehead Institute, created to bring the power of genomics to medicine. http://www.broad.mit.edu/ |
| BSBMB (Belgian Society of Biochemistry and Molecular Biology) The Belgian Biochemical Society was created at the initiative of Marcel Florkin to enable a Belgian society to join the newly proposed International Union of Biochemistry. http://www.icp.ucl.ac.be/bsbmb/welcome.html |
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| Cambridge School of Biological Sciences School of Biological Sciences at the University of Cambridge. http://www.bio.cam.ac.uk/ |
| Celera Publication Site Access the data utilized for the manuscript on Celera's assembled sequence of the Human Genome published in the February 16, 2001 edition of Science. http://www.celera.com/celera/publications |
| Center for Statistical Genetics Software GOLD, Haplotyper,Merlin, Power Calculator, QTDT, Relpair, Sibmed, Other. http://csg.sph.umich.edu/index.php |
| CEPH/GENETHON Integrated Map Part of the Fondation Jean Dausset - CEPH World-Wide-Web server containing CEPH-Généthon mapping data. http://www.cephb.fr/bio/ceph-genethon-map.html |
| CF Ttutorials This site contains high quality, in depth ColdFusion tutorials. http://www.cftutorials.com/index.cfm |
| Chemicon International Chemicon is the exclusive Manufacturer & Distributor of Roche Molecular Biochemicals Antibodies & Secondary Detection Systems. http://www.chemicon.com/ |
| CHLC Genetic Maps Genetic maps of the Cooperative Human Linkage Center. http://gai.nci.nih.gov/CHLC/ |
| CHLC Markers Cooperative Human Linkage Center integrated maps, including SNP locations. http://gai.nci.nih.gov/html-chlc/ChlcMarkers.html |
| Chromosome 21 Mapping and Sequencing Mapping and Sequencing Human Chromosome 21. German Sequencing Consortium. http://chr21.molgen.mpg.de/SI/suppl10830953.html |
| Chromosome 21 Mapping and Sequencing (Eleanor Roosevelt Institute) The purpose of this site is to provide a central location for chromosome 21 sequence, sequence annotation, map data, and information about resources developed at the Eleanor Roosevelt Institute. http://www.nsm.du.edu/eri/chromosome21.cfm |
| Classic 164 Currency Converter You can view any exchange rates among the 164 currencies for any day since 1 January 1990 through today. The currency converter is updated daily at 8:00 p.m. EST. http://www.oanda.com/converter/classic |
| Clontech Clontech develops, produces, and markets innovative biological products to the life science market worldwide. Clontech is a wholly owned subsidiary of Becton, Dickinson and Company. http://www.clontech.com/ |
| ClustalW2 ClustalW2 is a general purpose multiple sequence alignment program for DNA or proteins. http://www.ebi.ac.uk/Tools/clustalw2 |
| CMTnet Repository of information for research and treatment of Charcot-Marie-Tooth disease. http://www.ultranet.com/~smith/CMTnet.html |
| Community Research and Development Information Service (CORDIS) Community Research and Development Information Service (CORDIS) is an information space devoted to European research and development (R&D) activities. The aim of CORDIS is to support innovation that will stimulate economic growth and lead to the creation of new jobs. CORDIS is made available by the DG XIII (Directorate General for Telecommunications, Information Market, and Exploitation of Research) of the European Commission, within the context of the Commission's Innovation policy. CORDIS is an information space, filled with a huge array of accurate and up-to-date data on Europe's research and development activities and capacities. Each visitor to CORDIS is looking for a specific set of knowledge to satisfy specific needs. Our job is to ensure that the information space is perpetually replenished, and that the quest of each visitor is made as easy as possible. Many visitors are also offering knowledge. CORDIS is a marketplace where information and knowledge can be exchanged, where partnerships can be formed, and where European research is turned into benefits for European citizens. http://cordis.europa.eu/ |
| Cooperative Human Linkage Center (CHLC) Cooperative Human Linkage Center. Genetic maps showing the positions of genetic markers. Search by name for information on markers. CHLC publications. CHLC project information. http://gai.nci.nih.gov/html-chlc/ChlcMaps.html |
| Cordis Belgium CORDIS, The European Commission's Research and Development Information Service, is providing a service dedicated to the Belgian presidency of the Research council. The Belgian council presidency research and innovation service is available in French, Dutch, German and English. http://cordis.europa.eu/belgium/ |
| Coriell Cell Repository The CORIELL CELL REPOSITORIES provide essential research reagents to the scientific community by establishing, verifying, maintaining, and distributing cells cultures and DNA derived from cell cultures. These collections, supported by funds from the National Institutes of Health (NIH) and several foundations, are extensively utilized by research scientists around the world.. http://locus.umdnj.edu/ccr/ |
| CREDO CREDO is a web-based tool for computational detection of conserved sequence motifs in noncoding sequences. Credo integrates the analysis and results of five algorithms widely used for the computational detection of conserved sequence motifs in noncoding sequences: AlignACE, DIALIGN, FootPrinter, MEME and MotifSampler. http://mips.gsf.de/proj/regulomips/credo.htm |
| CreXmice The creation of a new Cre transgenic mouse line database (creXmice) was a necessity since the number of Cre lines has reached the hundreds and is still rapidly increasing.. http://nagy.mshri.on.ca/PubLinks/indexmain.php |
| CroW 21 The Human Chromosome 21 database at the Weizmann Institute (CroW 21) presents a sequence based map which integrates various sources of information about chromosome 21. Through the links to GeneCards, CroW 21 provides additional information about the genes, EST clusters, putative proteins and related diseases, and supplies links to numerous relevant databases. http://bioinformatics.weizmann.ac.il/chr21/ |
| CSHL Meetings & Courses Coldspring Harbor Laboratory Meetings and Courses. http://meetings.cshl.edu/ |
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| Darned Database of RNA editing in human. http://darned.ucc.ie |
| Database of Genomic Variants The Database of Genomic Variants is to provide a comprehensive summary of human large-scale genomic variants with information about frequency and their relation to genes, segmental duplications and genome assembly gaps. http://projects.tcag.ca/variation |
| DBASS3 Exonic splice site databases and analysis tools. http://www.som.soton.ac.uk/research/geneticsdiv/dbass3 |
| DBCat (InfoBioGen) DBCAT, The Public Catalog of Databases. DBCat is an attempt to gather all existing databases, as the Biocatalog for the software. http://www.infobiogen.fr/services/dbcat/ |
| dbEST (NCBI) dbEST is a division of GenBank that contains sequence data and other information on 'single-pass' cDNA sequences, or Expressed Sequence Tags, from a number of organisms. http://www.ncbi.nlm.nih.gov/dbEST/ |
| dbSNP (NCBI) The dbSNP database serves as a central repository for both single base nucleotide subsitutions and short deletion and insertion polymorphisms. http://ncbi.nlm.nih.gov/SNP/ |
| dbSTS (NCBI) dbSTS is an NCBI resource that contains sequence and mapping data on short genomic landmark sequences or Sequence Tagged Sites. Although dbSTS sequences are incorporated into the STS Division of GenBank, annotation in dbSTS is more comprehensive and includes detailed information about the contributors, experimental conditions and genetic map locations. In addition, NCBI regularly updates sequence similarity assignments using the BLAST family of programs. http://www.ncbi.nlm.nih.gov/dbSTS/ |
| DECIPHER Database of Chromosomal Imbalance and Phenotype in Humans using Ensembl Resources (DECIPHER) is a database of submicroscopic chromosomal imbalance and collects clinical information about chromosomal microdeletions/duplications/insertions, translocations and inversions and displays this information on the human genome map. https://decipher.sanger.ac.uk |
| DNA Mutation Checker DNA Mutation Checker has been created to help researchers to verify the transription and translation effects of DNA level sequence variation. http://www.ebi.ac.uk/cgi-bin/mutations/check.cgi |
| Dorland's Medical Dictionary A medical dictionary hosted by Merck & Co., Inc. http://www.mercksource.com/pp/us/cns/cns_hl_dorlands.jspzQzpgzEzzSzppdocszSzuszSzcomm |
| dPORE dPORE is a database that integrates information from promoter regions of human miRNA genes, SNPs, and predicted TFBSs in the promoter regions. The web-interface allows to explore the effect of SNPs on the transcriptional regulation of miRNA genes. The focus is on SNPs that affect TFBSs or lead to the creation of a TFBS. On the other hand, only TFBSs are included that are themselves affected by SNPs. http://apps.sanbi.ac.za/dpore |
| Draft Annotation Of The Human Genome A draft annotation and overview of the human genome. http://pandora.med.ohio-state.edu/Annotation/ |
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| EBI Database Services Simple query retrieval using SRS, Ensembl (Automatic annotation of eukaryotic genomes), dbEST and dbSTS Queries, EMEST (database of EST sequences), EuroGeneIndexes (EST alignments and clusters), MitBase Server (Mitochondrial DNA database server), IMGT (ImMunoGeneTics database), EDGP (European Drosophila Genome Project server), Parasites (Parasite Genome Databases), Mutations (Sequence variation database project), Genomes Server (Completed Genomes at the EBI), Genome MOT (Genome Monitoring Table), SWISS-PROT, TrEMBL, InterPro, etc., Sequence Structure Classification Databases, DSSP (Database of Secondary Structure Assignments), HSSP (Homology Derived Secondary Structure Assignments), FSSP (Fold Classification based on Structure-Structure Assignments), DALI (Protein Structure Domain Dictionary), Macromolecular Structure Databases, EBI-MSD (The EBI-Macromolecular Structure Database), RHdb Server (Radiation Hybrid Database server). http://www.ebi.ac.uk/Databases/ |
| ECACC The European Collection of Cell Cultures (ECACC) is a provider of high quality cell cultures and associated services to industry and the academic research community. http://www.ecacc.org.uk/ |
| Edinburgh Mouse Atlas Project (EMAP) The emap Atlas is a digital Atlas of mouse embryonic development. It is based on the definitive books of mouse embryonic development by Theiler (1989) and Kaufman (1992) yet extends these studies by creating a series of interactive three-dimensional computer models of mouse embryos at successive stages of development with defined anatomical domains linked to a stage-by-stage ontology of anatomical names. http://genex.hgu.mrc.ac.uk/ |
| EFB Task Group on Public Perceptions of Biotechnology The EFB Task Group on Public Perceptions of Biotechnology, established in 1991, has some 50 members. These have been brought together from a wide range of groups with interests in biotechnology from across Europe. Its primary aim is to foster greater public awareness and understanding of biotechnology and to encourage public debate. http://efbpublic.org/ |
| Eleanor Roosevelt Institute The Eleanor Roosevelt Institute was founded in 1961 on the belief that biomedical and genetic research are the most cost-effective, long-term approaches to the eventual conquest of human afflictions like cancer, premature aging, birth defects and genetic diseases.. http://www.nsm.du.edu/eri/ |
| Electronic PCR Use the Electronic PCR feature to test a DNA sequence for the presence of sequence tagged sites. http://www.ncbi.nlm.nih.gov/genome/sts/epcr.cgi |
| Elsevier Science Elsevier Science serves the advancement of science, technology and medicine by improving the efficiency and effectiveness of communication among researchers and professionals world-wide and by providing solutions to their information needs. http://www.elsevier.com/ |
| EMBL (European Molecular Biology Laboratory) The European Molecular Biology Laboratory. http://www.embl-heidelberg.de/ |
| EMBL-EBI Gene Expression Atlas The Gene Expression Atlas is a semantically enriched database of meta-analysis based summary statistics over a curated subset of ArrayExpress Archive, servicing queries for condition-specific gene expression patterns as well as broader exploratory searches for biologically interesting genes/samples.. http://www.ebi.ac.uk/gxa |
| EMBNet News Quarterly newsletter of the European Molecular Biology Net. http://ben.vub.ac.be/embnet.news/ |
| EMotif Search Search protein motifs derived from the BLOCKS and PRINTS databases. http://dna.stanford.edu/emotif/ |
| Encyclopaedia Britannica Online The Encyclopædia Britannica is the world's most comprehensive reference product, a distinction it has held since its first publication in 1768. EB Online includes the complete encyclopedia, as well as Merriam-Webster's Collegiate Dictionary and the Britannica Book of the Year. You can also use EB Online to search an Internet directory that includes more than 130,000 links to Web sites selected, rated, and reviewed by Britannica editors . http://search.eb.com |
| Endeavour Endeavour is a software application for the computational prioritisation of `test genes', based on a set of `training genes'. The ranking of a test gene is based on its similarity with the training genes. http://homes.esat.kuleuven.be/~bioiuser/endeavour/endeavour.php |
| Ensembl Ensembl is about providing researchers with access to state of the art,automatic annotation of genomic data. Ensembl provides complete and consistent annotation across the human genome. It will soon also process mouse. A central element of the Ensembl project is openness: all data is freely available; all code is freely available. http://www.ensembl.org/ |
| Entrez Gene (NCBI) Entrez Gene provides a unified query environment for genes defined by sequence and/or in NCBI's Map Viewer. http://www.ncbi.nih.gov/entrez/query.fcgi?db=gene |
| eQTL Browser UChicago Browse eQTLs identified in recent studies in multiple tissues. http://eqtl.uchicago.edu/cgi-bin/gbrowse/eqtl/ |
| ESEfinder In silico analysis tool foor exonic splicing enhancers (ESEs). http://rulai.cshl.edu/tools/ESE/ |
| Espacenet portal Esp@cenet is Europe's network of patent databases. http://www.espacenet.com/ |
| eTBlast A text similarity-based engine for searching literature collections. http://invention.swmed.edu/etblast |
| Eurogentec Founded in 1985 as a spin-off of the University of Liège, Eurogentec has oriented its business along two main lines: the development, marketing and distribution of a wide range of products and services in molecular biology on the one hand and research and development services for the biopharmaceutical industry on the other. http://www.eurogentec.com |
| European Bioinformatics Institute (EBI) The EMBL - European Bioinformatics Institute (EBI) is a centre for research and services in bioinformatics. The Institute manages databases of biological data including nucleic acid, protein sequences and macromolecular structures. Database searching, browsing and analysis tools are available. http://www.ebi.ac.uk/ |
| European CMT Consortium A formal collaborative network of European groups working on the clinical (neurology, neuropathology and medical genetics i.e. DNA diagnosis), genetical (molecular genetics i.e. gene and mutation researchers) and functional (in vitro and in vivo models) aspects of Hereditary Motor and Sensory Neuropathies (HMSN), and related peripheral neuropathies. http://www.molgen.ua.ac.be/CMT |
| European Collaborative Interspecific Mouse Backcross database (EUCIB) The Mouse Backcross Database (MBx) was written to hold experimental data derived from the EUCIB project. Searches are done on copies of the database files which are updated overnight. The data is displayed in a similar format to the retrieval forms of the Sybase version of the database. Some of the data has restricted access. http://www.mgu.har.mrc.ac.uk/servlet/EUCIB.mapViewer |
| European Directory of DNA Laboratories (EDDNAL) The European Directory of DNA Laboratories (EDDNAL) is mainly intended for clinical geneticists and molecular biologists. It provides contact names and addresses for 314 DNA laboratories and details services on 507 genetic diseases. http://www.eddnal.com/ |
| European Patent Office The European Patent Office (EPO) grants European patents for the contracting states to the European Patent Convention (EPC). The mission of the EPO is to support innovation, competitiveness and economic growth for the benefit of the citizens of Europe. http://www.european-patent-office.org |
| European Society of Human Genetics (ESHG) The European Society of Human Genetics is an international professional society founded in 1967 which promotes research in basic and applied human and medical genetics and facilitates contact between all persons who share these aims. http://www.eshg.org/ |
| Exome Variant Server The goal of the NHLBI GO Exome Sequencing Project (ESP) is to discover novel genes and mechanisms contributing to heart, lung and blood disorders by pioneering the application of next-generation sequencing of the protein coding regions of the human genome across diverse, richly-phenotyped populations and to share these datasets and findings with the scientific community to extend and enrich the diagnosis, management and treatment of heart, lung and blood disorders.. http://evs.gs.washington.edu/EVS |
| Expert Protein Analysis System (ExPASy) This is the ExPASy (Expert Protein Analysis System) proteomics server of the Swiss Institute of Bioinformatics (SIB). This server is dedicated to the analysis of protein sequences and structures as well as 2-D PAGE. http://www.expasy.ch/ |
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| FASTLINK Home Page FASTLINK is a software package to do the computations for genetic linkage analysis. http://www.cs.rice.edu/~schaffer/fastlink.html |
| Fastlink program + others ?. ftp://watson.hgen.pitt.edu/pub/ |
| Federation of European Neuroscience Societies (FENS) FENS consists of European National Neuroscience Societies and other European Societies in the field of neuroscience. FENS is established to advance research and education in the field of neurosciences. http://www.fens.org/ |
| FirstEF First-exon and promoter prediction program for human DNA. http://rulai.cshl.org/tools/FirstEF/ |
| Flybase A Database of the Drosophila Genome. http://flybase.bio.indiana.edu/ |
| FreeMedicalJournals.Com Within the next two years, the most important medical journals will be available online, free and in full-text. The access to free scientific knowledge will have a major impact on medical practice and attract Internet visitors to these journals. Journals that restrict access to their Web sites will lose popularity. The Free Medical Journals Site is dedicated to the promotion of free access to medical journals over the Internet. A list of free online medical journals is maintained. http://www.freemedicaljournals.com/ |
| FuguBase IMCB FUGU Genome Project website. http://www.fugu-sg.org/ |
| Fund for Scientific Research (FWO) The FWO encourages and finances fundamental scientific research in universities of the Flemish Community and in institutions for scientific research. http://www.fwo.be/ |
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| G2D G2D is a database of candidate genes for mapped inherited human diseases. Candidate priorities are automatically established by a data mining algorithm that extracts putative genes in the chromosomal region where the disease is mapped, and evaluates their possible relation to the disease based on the phenotype of the disorder. http://coot.embl.de/g2d// |
| Galaxy Genomic Workbench A platform for interactive large-scale genome analysis. http://g2.trac.bx.psu.edu/ |
| GenBank (NCBI) GenBank is the NIH genetic sequence database, an annotated collection of all publicly available DNA sequences. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Nucleotide |
| Gene Expression Omnibus (GEO) The Gene Expression Omnibus is a gene expression and hybridization array data repository, as well as a curated, online resource for gene expression data browsing, query and retrieval. http://www.ncbi.nlm.nih.gov/geo/ |
| Gene Information Search Tool (GIST) This site has been designed to allow the search of multiple genomic databases without having to bounce all over the web. These searches do not allow all of the more complex searching available at the specific sites. Rather, this site is useful for getting the 'gist' of a gene or marker and to identify databases which contain information on the gene or marker of interest. Gene data is not currently limited to any organism. The marker data is essentially human only. http://genome.cwru.edu/gist/gist.html |
| Gene Ontology The Gene Ontology project provides a controlled vocabulary to describe gene and gene product attributes in any organism.. http://www.geneontology.org |
| GeneCards GeneCards is a database of human genes, their products and their involvement in diseases. It offers concise information about the functions of all human genes that have an approved symbol, as well as selected others. It is especially useful for those who are searching for information about large sets of genes or proteins, e.g. for scientists working inThe GeneCards database is developed and maintained in the Crown Human Genome Center at the Weizmann Institute of Science in Israel. Founded in 1997, the GeneCards project defined as its goal to integrate the fragments of information scattered over a variety of specialized databases into a coherent picture.. http://www.genecards.org/index.shtml |
| Genemap (NCBI) The new gene map includes the locations of more than 30,000 genes and provides an early glimpse of some of the most important pieces of the genome. Even more importantly, the map can be immediately applied by scientists to the identification and isolation of genes that either directly cause human ailments or increase our susceptibility to disease. http://www.ncbi.nlm.nih.gov/genemap99/ |
| GenePop GENEPOP is a population genetics software package. http://wbiomed.curtin.edu.au/genepop/ |
| GeneSapiens The GeneSapiens database, which was created through a cooperative effort by researchers at the Institute of Molecular Medicine Finland (FIMM), the VTT Technical Research Centre of Finland and the Tampere University of Technology, contains all available information of the expression of 17,330 human genes in both healthy and disease tissues. http://www.genesapiens.org |
| Geneservice Ltd Geneservice Ltd is a contract research organisation and biological resource centre. In May 2005 we were formed as a limited company (company number 05355417) in a management buyout of MRC geneservice. http://www.geneservice.co.uk/home/ |
| Généthon Human Genome Research Centre. http://www.genethon.fr/php/index_us.php |
| Genetic Location Database (LDB) The genetic location database (LDB) gives locations for expressed sequences and polymorphic markers. Locations are obtained by integrating data of different types (genetic linkage maps, radiation hybrid maps, physical maps, cytogenetic data and mouse homology) and constructing a single 'summary' map. The data are obtained from internet, published sources and from data and maps generated within the Wessex Human Genetics Institute. The component maps and all other data are available from this site. http://cedar.genetics.soton.ac.uk/public_html/LDB2000/LDB96/menu.html |
| Genetics Society of America (GSA) Founded in 1931, the Genetics Society of America offers membership to scientists and academicians interested in the field of genetics studies. The Society publishes the journal 'Genetics' which is circulated monthly to members of the Society and approximately 2,000 libraries worldwide. http://www.genetics-gsa.org/ |
| Genetix Genetix develop novel instruments and consumables that accelerate life sciences research and drug discovery. http://www.genetix.com/ |
| GenMapDB The goal of this project is to create a resource of mapped bacterial artificial chromosome (BAC) clones that span the human genome at 1-Mb intervals. GenMapDB is a database that contains information on the mapped BAC clones. http://genomics.med.upenn.edu/genmapdb/ |
| Genome Channel The Genome Channel is a series of interface tools for visualization and querying the reference human genome and other genomes assembled and annotated by the Genome Annotation Consortium (GCA). It provides access to a variety of computationally generated analyses of genomic DNA sequence collected and assembled from a number of sequencing centers as well as sequences contained in archival public databases. http://compbio.ornl.gov/channel/index.html |
| Genome Database (GDB) The Genome Database. An international collaboration in support of the Human Genome Project. GDB Data Priority #1 is sequence map integration, as represented by STS locations in the sequence. http://www.gdb.org/ |
| Genome Database (GDB) Germany The Genome Database mirror site at DKFZ Germany. An international collaboration in support of the Human Genome Project. GDB Data Priority #1 is sequence map integration, as represented by STS locations in the sequence. http://gdbwww.dkfz-heidelberg.de/ |
| Genome Database (GDB) The Netherlands The Genome Database mirror site at the University of Nijmegen, The Netherlands. An international collaboration in support of the Human Genome Project. GDB Data Priority #1 is sequence map integration, as represented by STS locations in the sequence. http://www-gdb.caos.kun.nl/ |
| Genome Database (GDB) UK The Genome Database mirror site at the HGMP Resource Centre, UK. An international collaboration in support of the Human Genome Project. GDB Data Priority #1 is sequence map integration, as represented by STS locations in the sequence. http://www.hgmp.mrc.ac.uk/gdb/gdbtop.html |
| Genome News Network Online magazine with informed coverage of important developments in genomic research around the world. http://gnn.tigr.org/ |
| Genomes Guide - Homo Sapiens (NCBI) Human Genome Resources. http://www.ncbi.nlm.nih.gov/genome/guide/human/ |
| GenScan This server provides access to the program Genscan for predicting the locations and exon-intron structures of genes in genomic sequences from a variety of organisms. http://genes.mit.edu/GENSCAN.html |
| Gentaur Your supplier of life science research products. http://www.gentaur.com |
| Gibbs Motif Sampler The Gibbs Motif Sampler will allow you to identify motifs, conserved regions, in DNA or protein sequences. http://bayesweb.wadsworth.org/gibbs/gibbs.html |
| GOLD GOLD: Genomes Online Database, is a World Wide Web resource for comprehensive access to information regarding complete and ongoing genome projects around the world.. http://www.genomesonline.org/index.htm |
| Google Scholar Google Scholar enables you to search specifically for scholarly literature, including peer-reviewed papers, theses, books, preprints, abstracts and technical reports from all broad areas of research. Use Google Scholar to find articles from a wide variety of academic publishers, professional societies, preprint repositories and universities, as well as scholarly articles available across the web. http://scholar.google.com |
| Gordon Research Conferences The Gordon Research Conferences provide an international forum for the presentation and discussion of frontier research in the biological, chemical, and physical sciences, and their related technologies. http://www.grc.uri.edu/ |
| GRAIL ... http://compbio.ornl.gov/Grail-1.3/ |
| GrantsNet AAAS and HHMI created a FREE, searchable database of biomedical funding options from non-profit organizations and federal agencies. In addition to a growing database of funding opportunities specifically geared to scientists-in-training, GrantsNet provides tips from grant reviewers, analysis of funding and research trends, profiles of successful grant seekers, an alphabetized directory of funding sources, and monthly news highlighting brand new awards . http://sciencecareers.sciencemag.org/funding |
| GREAT The GGenomic Regions Enrichment of Annotations Tool (GREAT) assigns biological meaning to a set of non-coding genomic regions by analyzing the annotations of the nearby genes. Thus, it is particularly useful in studying cis functions of sets of non-coding genomic regions. Cis-regulatory regions can be identified via both experimental methods (e.g. chromatin immunoprecipitation followed by massively parallel sequencing) and by computational methods (e.g. sequence conservation in a given clade). . http://great.stanford.edu |
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| HAP (Haplotype Resolution using Imperfect Phylogeny) HAP is a haplotype analysis system which is aimed in helping geneticists perform disease association studies. The main feature of HAP is a phasing method which is based on the assumption of imperfect phylogeny. The phasing method is very efficient, which allows HAP to work with very large data sets, and to perform other operations such as finding a partition of the region into blocks of limited diversity or performing association tests on each of these blocks.. http://research.calit2.net/hap/ |
| HapMap The goal of the International HapMap Project is to develop a haplotype map of the human genome, the HapMap, which will describe the common patterns of human DNA sequence variation. The HapMap is expected to be a key resource for researchers to use to find genes affecting health, disease, and responses to drugs and environmental factors. The information produced by the Project will be made freely available. http://www.hapmap.org |
| Health Channel A service of Baylor College of Medicine, providing continuing medical education, healthcare news and staff development for all members of the healthcare team. http://www.healthchannelweb.com/home/default.cfm |
| HGVbase The objective of HGVbase (the Human Genome Variation Database) is to provide an accurate, high utility and ultimately fully comprehensive catalog of normal human gene and genome variation, useful as a research tool to help define the genetic component of human phenotypic variation.. http://hgvbase.cgb.ki.se/ |
| HOT-SKIP HOT-SKIP systematically examines all possible substitutions in each exonic position that are most likely to skip the submitted exonic sequence. It calculates the total number of ESSs, ESEs and their ratio. http://hot-skip.img.cas.cz |
| HSA21Db The Integrated Chromosome 21 Database at MPIMG-Berlin. http://www.rzpd.de/general/html/Chrom21/ |
| HUGE A Database of Human Unidentified Gene-Encoded Large Proteins Analyzed by Kazusa cDNA Project. We plan to sequence and analyze long (>4 kb) human cDNAs and to establish methods by using the sequence data how to predict the primary structure of proteins of various biological activities. Currently, we focus on the analysis of cDNA clones encoding particularly large proteins (>50 kDa). http://zearth.kazusa.or.jp/huge/index.html |
| Human Chromosome 21 - MPIMG Berlin The German Genomic Sequencing Consortium is planning to sequence over 25 Mb of human chromosome 21 by the end of 1999. Sequence data will be made freely available via ftp and/or web sites maintained by the sequencing centers. http://chr21.rz-berlin.mpg.de/sequencing1.html |
| Human Chromosomes HUGO website compiling all relevant information concerning chromosome maps: genetic and physical maps, genes, disease loci, sequencing progres ... http://www.gdb.org/hugo/ |
| Human Gene Mutation Database (HGMD) The Human Gene Mutation Database (HGMD) represents an attempt to collate known gene lesions responsible for human inherited disease. This database, whilst originally established for the study of mutational mechanisms in human genes, has now acquired a much broader utility in that it embodies an up-to-date and comprehensive reference source to the spectrum of inherited human gene. Thus, HGMD provides information of practical diagnostic importance to (i) researchers and diagnosticians in human molecular genetics, (ii) physicians interested in a particular inherited condition in a given patient or family, and (iii) genetic counsellors. http://www.hgmd.cf.ac.uk/ac/index.php |
| Human Gene Nomenclature Committee (HGNC) The HUGO Gene Nomenclature Committee designates 'approved' symbols for human genes in accordance with the Guidelines for Human Gene Nomenclature. It is necessary to provide a unique symbol for each gene, preferably one which maintains parallel construction in different members of a gene family and which can also be used in other species, especially the mouse. The Nomenclature Committee is responsible for the approval of these symbols, and also designates a longer and more descriptive name. http://www.genenames.org |
| Human Gene Nomenclature Database Approved Human Gene Symbols AND Literature Aliases. http://www.genenames.org/cgi-bin/hgnc_search.pl |
| Human Genome Project Information Site for information about the U.S. and worldwide Human Genome Project. http://www.ornl.gov/hgmis/home.html |
| Human Genome Sequencing Retrieve human sequence contigs etc.. http://www.ncbi.nlm.nih.gov/genome/seq/HsHome.shtml |
| Human Genome Variation Society The Society aims to foster discovery and characterization of genomic variations including population distribution and phenotypic associations. We will promote collection, documentation and free distribution of genomic variation information and associated clinical variations and endeavor to foster the development of the necessary methodology and informatics. http://www.hgvs.org/ |
| Human Nature Review Internet Explorer Search Toolbar This invaluable free toolbar allows you to search resources such as PubMed, Scirus, Encarta, Encyclopedia Britannica and many other sites directly from your Internet Explorer (v. 5.01 or higher) toolbar. A term can be searched across multiple databases with a single mouse click, and the toolbar can be configured to search the sites that you use most often in your work. It is similar to the Google toolbar but is designed specifically for those involved in the natural sciences, the social sciences and philosophy. http://human-nature.com/searchbar.html |
| Human Protein Atlas The Swedish Human Protein Atlas project has been set up to allow for a systematic exploration of the human proteome using Antibody-Based Proteomics. This is accomplished by combining high-throughput generation of affinity-purified antibodies with protein profiling in a multitude of tissues and cells assembled in tissue microarrays. Confocal microscopy analysis using human cell lines is performed for more detailed protein localization. The program hosts the Human Protein Atlas portal with expression profiles of human proteins in tissues and cells.. http://www.proteinatlas.org |
| HUM-MOLGEN HUM-MOLGEN is one of the world's largest and best Internet sources for the latest information in human molecular genetics (more than 5.500 mailing list subscribers and 40.000 WWW users). Our service provides the opportunity to communicate with scientists, physicians and other genetics professionals worldwide, the table of contents of leading journals, comprehensive listings of meetings and seminars and a large classified ads section in genetics and medicine. http://hum-molgen.org/ |
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| IceLogo IceLogo takes a protein alignment as input and generates nice graphical views of conserved residues. http://iomics.ugent.be/icelogoserver/main.html |
| iHOP - Information Hyperlinked over Proteins iHOP provides a network of genes and proteins concurring through the scientific literature touching on phenotypes, pathologies and gene function.. http://www.ihop-net.org/UniPub/iHOP/ |
| Illinois Natural History Survey Ecology and statistical software server. http://nhsbig.inhs.uiuc.edu/ |
| IMEx-web: Imperfect Microsatellite Extraction Webserver Imperfect Microsatellite Extractor (IMEx) is a tool for extracting perfect as well as imperfect Microsatelites or Simple Sequence Repeats (SSR's) or Short Tandem Repeats (STR's) from genome sequences. http://203.197.254.154/IMEX |
| InCyte Genomics The mission of the Incyte Network is to facilitate the development of partnerships among industry and academia, and ultimately the healthcare community, which generate unexpected breakthroughs in the discovery and utilization of genomics. http://www.incyte.com |
| Inherited Peripheral Neuropathies Mutation Database The IPNMDB aims at collecting all mutations related to Inherited Peripheral Neuropathies (IPN). Mutations are collected from the literature and by direct submission through this web site. http://www.molgen.ua.ac.be/CMTMutations/ |
| Innovatiegerichte Onderzoeksprogramma's Nederland Met innovatiegerichte onderzoeksprogramma's (IOP's) wil de overheid de onderzoekswereld toegankelijker maken voor het bedrijfsleven en contacten tussen bedrijfsleven en onderzoekswereld verbeteren en intensiveren. htthttp://www.senternovem.nl/iop/ |
| Institute for General, Inorganic and Theoretical Chemistry This institute at the University of Innsbruck is responsible for scientific education in general, inorganic and theoretical chemistry. http://www-c724.uibk.ac.at/ |
| Institute for Genomic Research (TIGR) The Institute for Genomic Research is a not-for-profit research institute with interests in structural, functional, and comparative analysis of genomes and gene products in viruses, eubacteria, pathogenic bacteria, archaea, and eukaryotes (both plant and animal), including humans. http://www.tigr.org/ |
| InsulatorDB Insulators, with the functions of enhancer-blocking and domain-bordering, are critical regulatory elements for gene expression control and represent a class of diverged DNA sequences capable of shielding genes against inappropriate cis-regulatory signals from their genomic neighborhood. To analyze this important type of DNA regulatory elements, we created a CTCF binding site database (CTCFBSDB), a comprehensive collection of experimentally determined and computationally predicted CTCF binding sites (CTCFBS) from the literature. The database is designed to facilitate the studies on insulators and their roles in demarcating functional genomic domains. http://insulatordb.uthsc.edu |
| InterPro InterPro is an integrated resource of protein domains and functional sites. The beta release (October 1999) of InterPro was built from Pfam 4.0, PRINTS 23.1 and PROSITE 16.0. This release contains 2,423 entries, representing 1776 families, 615 domains, 27 repeats and 8 post-translational modification sites encoded by approximately 4,300 different regular expressions, profiles, fingerprints and HMMs. http://www.ebi.ac.uk/interpro/index.html |
| ISI Web of Knowledge ISI Web of Knowledge is an integrated platform designed to support research in academic, corporate, government, and not-for-profit organizations. Includedes Current Contents, Web of Science, Journal Citation Reports etc. Use this site to lookup impact factors, citation indexes and related data.. http://isiknowledge.com |
| IWETO De Inventarisatie van het Wetenschappelijk en Technologisch Onderzoek in Vlaanderen (IWETO) brengt het wetenschappelijk onderzoek in Vlaanderen in kaart. http://www.iweto2.rl.ac.uk:8080/reinex/lang.do?language=nl&country=BE&page=%2Fhome.do |
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| Jackson Laboratory The Jackson Laboratory is an independent non-profit mammalian research laboratory. Research, Resources, Education, Courses & Conferences, Mouse Genome Informatics and JAX® MICE, an information resource describing 2400+ strains of genetically defined mice for biomedical research. http://www.jax.org/ |
| JAX® MICE JAX® Mice are the world's best characterized and most widely published strains, and include the only available sequenced mice.. http://jaxmice.jax.org/index.html |
| John Wiley & Sons John Wiley & Sons, Inc., develops, publishes, and sells products in print and electronic media for the educational, professional, scientific, technical, medical, and consumer markets worldwide. http://www.wiley.co.uk |
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| KAHAWA Kahawa biedt een overzicht van alle databanken die voor UA-gebruikers toegankelijk zijn. http://anet.ua.ac.be/kahawa/ua/ |
| Katholieke Universiteit Leuven (KUL) ... http://www.kuleuven.ac.be/kuleuven/ |
| KEGG Kyoto Encyclopedia of Genes and Genomes. KEGG is a database of biological systems, consisting of genetic building blocks of genes and proteins (KEGG GENES), chemical building blocks of both endogenous and exogenous substances (KEGG LIGAND), molecular wiring diagrams of interaction and reaction networks (KEGG PATHWAY), and hierarchies and relationships of various biological objects (KEGG BRITE). KEGG provides a reference knowledge base for linking genomes to biological systems and environments by the processes of PATHWAY mapping and BRITE mapping. . http://www.genome.jp/kegg |
| Koninklijke Vlaamse Academie van België voor Wetenschappen en Kunsten - KVAB De Academie is een onafhankelijk instituut dat wetenschap en kunst stimuleert door het organiseren van wetenschappelijke en culturele activiteiten, het oprichten van nationale comités, vertegenwoordiging in internationale organisaties en fora, het aantrekken van buitenlandse professoren, en het formuleren van adviezen aan de regering. http://www.kvab.be |
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| LabVelocity The free resource for biotechnology and life science. http://researchlink.labvelocity.com/ |
| Leiden Genome Technology Center (LGTC®) For a period of 4 years, the GTC (Genome Technology Centre) in Leiden, formerly known as the YAC Screening Centre Leiden (YSCL), has been participating in a European Consortium with as main purpose to acquire, maintain and distribute large insert DNA clone resources throughout Europe. The GTC's contribution to this effort was maintaining libraries, distributing clones, hybridisation based library screening and exchanging knowledge and protocols. The GTC facilities were continuously expanded and now include YAC, PAC and specialized cosmid libraries, including chromosome specific and Fugu cosmid libraries. http://www.lgtc.nl/ |
| LITBIO Molecular medicine has progressed to the point where the majority of human genes and proteins have been characterized and computational methods are necessary for further understanding of structure, mechanism and function. Our aim is to develop a Laboratory for Interdisciplinary Technologies in Bioinformatics (LITBIO) applied to Genomics, Transcriptomics, Proteomics and Metabolomics.. http://www.litbio.org/main.htm |
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| Mammalian Genome Database (MGD) The Mammalian Homology query form enables you to search for homologies between two or more mammalian species. http://www.informatics.jax.org/searches/homology_form.shtml |
| Medical Subject Headings (MeSH) Browser The MeSH Browser is an online vocabulary look-up aid available for use with MeSH (Medical Subject Headings). It is designed to help quickly locate descriptors of possible interest and to show the hierarchy in which descriptors of interest appear. http://www.nlm.nih.gov/mesh/meshhome.html |
| MendelWeb MendelWeb is an educational resource for teachers and students interested in the origins of classical genetics, introductory data analysis, elementary plant science, and the history and literature of science. http://www.mendelweb.org/ |
| Merriam-Webster OnLine Webster Online: dictionary and thesaurus. http://www.m-w.com/ |
| MGuide The Brown Lab's complete guide to microarraying for the molecular biologist. http://cmgm.stanford.edu/pbrown/mguide/ |
| MicroSNiPer MicroSNiPer, which predicts the impact of a SNP on putative microRNA targets. This application interrogates the 3'-untranslated region and predicts if a SNP within the target site will disrupt/eliminate or enhance/create a microRNA binding site. http://cbdb.nimh.nih.gov/microsniper |
| MINT MINT is a curated database designed to store functional interactions between biological molecules (proteins, RNA, DNA). Beyond cataloguing the formation of binary complexes, MINT was conceived to store other type of functional interactions namely enzymatic modifications of one of the partners. Presently MINT focuses on experimentally verified protein-protein interactions. Both direct and indirect relationships are considered. http://mint.bio.uniroma2.it/mint/Welcome.do |
| miRBase Information on various aspects of miRNAs and the miRBase Sequence database and Registry. http://www.mirbase.org |
| mirGen miRGen is an integrated database of miRNA gene transcripts, transcription factor binding sites, miRNA expression profiles and single nucleotide polymorphisms associated with miRNAs. http://diana.cslab.ece.ntua.gr/mirgen |
| Mitelman Database of Chromosome Aberrations in Cancer The information in the Mitelman Database of Chromosome Aberrations in Cancer relates chromosomal aberrations to tumor characteristics, based either on individual cases or associations. http://cgap.nci.nih.gov/Chromosomes/Mitelman |
| modENCODE The National Human Genome Research Institute (NHGRI) model organism ENCyclopedia Of DNA Elements (modENCODE) Project will try to identify all of the sequence-based functional elements in the Caenorhabditis elegans and Drosophila melanogaster genomes. . http://www.modencode.org |
| Molecular Genetics Course Molecular Genetics by Ulrich Melcher, Oklahoma State University. http://opbs.okstate.edu/~melcher/MG/MG01.html |
| Mouse Genome Informatics (MGI) The Mouse Genome Informatics (MGI) web site provides integrated access to various sources for information on the genetics and biology of the laboratory mouse. The MGI resource comprises the Mouse Genome Database (MGD), the Gene Expression Database (GXD) and related resources including the Mouse Tumor Biology database, the Rat Data resource, Michael Festing's Listing of Inbred Strains of Mice and Rats, and MouseBLAST. http://www.informatics.jax.org/ |
| mPrimer3 Modified Primer3 (GenomeMasker version). Primer design tool. http://bioinfo.ebc.ee/mprimer3 |
| MRC Mammalian Genetics Unit and Mouse Genome Centre The Mammalian Genetics Unit and Mouse Genome Centre at Harwell comprise an integrated campus for mouse genetics research with excellent facilities for molecular genetics, genomics, mutagenesis, transgenesis and informatics. The Unit uses a wide range of mouse genetic approaches for both systematic and targeted approaches to the study of gene function, with particular emphasis on mouse models of human genetic disease. http://www.mgu.har.mrc.ac.uk/ |
| Multiplicon Multiplicon is active in the field of Applied Genomics and focus on the development of innovative analysis-tools for genomic research. http://www.multiplicon.com/ |
| Mutation Database Catalog This list was compiled by Rania Horaitis with the assistance of R.G.H. Cotton, Mutation Research Centre, Melbourne. http://www.genomic.unimelb.edu.au/mdi/dblist/dblist.html |
| Mutationdiscovery.com MutationDiscovery.com is a free resource for people doing research in the area of genetic variation. The site includes entries for thousands of genes, and each entry presents known variations in the context of the genomic sequence for the gene. The site also includes PCR and DHPLC protocols to help researchers apply Transgenomic WAVE nucleic acid fragment analysis technology to the detection of both new and previously observed genetic variations. http://www.mutationdiscovery.com/md/MD.com/home_page.jsp |
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| NAR 27(1): Biological Databases The 1999 Database Issue of Nucleic Acids Research marks the sixth anniversary of this issue dedicated to factual biological databases. The purpose of the issue is to inform working biologists of the specialized data resources currently available. In the current issue there are descriptions of more than 103 databases, plus a compilation by Dr C. Burks that includes databases previously described in Nucleic Acids Research , but no longer featured as full articles, as well as selected other databases that are relevant to molecular biologists. NAR Online contains hot links to all of the databases included in the compilation as well as brief summaries of the content of each database. http://www3.oup.co.uk/nar/Volume_27/Issue_01/ |
| National Center for Biotechnology Information (NCBI) Established in 1988 as a national resource for molecular biology information, NCBI creates public databases, conducts research in computational biology, develops software tools for analyzing genome data, and disseminates biomedical information - all for the better understanding of molecular processes affecting human health and disease. http://www.ncbi.nlm.nih.gov/ |
| Nature Science Update The latest research reported by Nature's science writing team. Now updated daily at midnight GMT.. http://helix.nature.com/nsu/ |
| Nature's Genome Gateway Latest Genome News: Special News Report on the HGP. http://www.nature.com/genomics/ |
| NCBI Established in 1988 as a national resource for molecular biology information, NCBI creates public databases, conducts research in computational biology, develops software tools for analyzing genome data, and disseminates biomedical information - all for the better understanding of molecular processes affecting human health and disease. http://www.ncbi.nlm.nih.gov/ |
| NCBI - Map Viewer Map Viewer allows you to view and search an organism's complete genome, display chromosome maps, and zoom into progressively greater levels of detail, down to the sequence data for a region of interest. http://www.ncbi.nlm.nih.gov/mapview/ |
| NCBI Clone Registry The NCBI Clone Registry is a database that integrates information about genomic clones and libraries, including sequence data, genomic position, and distributor information. http://www.ncbi.nlm.nih.gov/genome/clone/ |
| NCBI dbVar The Database of Genomic Structural Variation (dbVar) contains data and analyses from studies on large-scale genomic variation and provides associations of defined variants with phenotype information. http://www.ncbi.nlm.nih.gov/dbvar |
| NCBI Short Read Archive (SRA) The NCBI Short Read Archive (SRA) (www.ncbi.nlm.nih.gov/Traces/sra/) is a repository for data from sequencing projects that use the new massively parallel sequencing technologies, often called next-generation sequencing.. http://www.ncbi.nlm.nih.gov/Traces/sra |
| NCGR The National Center for Genome Research (NCGR) develops coordinated methods, such as software tools, to help scientists comprehend biological data. People around the world can benefit from our programs through improved food crops, a cleaner environment, and better medical treatments. NCGR works in a new field, bioinformatics, that merges biology and computers to apply genetic data to humanity's best possible advantage. NCGR is a nonprofit research organization in Santa Fe, New Mexico USA. http://www.ncgr.org/ |
| NetMul a WWW online multivariate analysis service. http://citeseer.ist.psu.edu/50425.html |
| Netscape People Finder ... http://home.netscape.com/netcenter/whitepages.html |
| Network Tools Ping, Trace, WWWhois, Reverse IP Lookup etc... http://www.network-tools.com |
| Neuroguide.com A searchable and browsable index of neuroscience resources available on the Internet: neurobiology, neurology, neurosurgery, psychiatry, psychology, cognitive science sites and information on human neurological diseases. http://www.neuroguide.com/ |
| Neuroscion Neuroscion is the complete web-based integrated information service for anyone doing research in any branch of neuroscience. With a variety of customizable features, free membership and paid subscription options available to suit your needs at any stage in the research cycle, you can rely on Neuroscion as your definitive resource for fast and easy access to neuroscience informationboth formal (peer-reviewed articles, reference works, etc.) and informal (news, discussion forums, etc.). Developed by Elsevier Science, Neuroscion is initially offering Elsevier Science publications, but will add those of other publishers, including professional societies, as the system grows. http://neuroscion.com/ |
| NextBio NextBio is a life science search engine. You can search through tens of thousands of study results with billions of data points spanning across different experimental platforms, organisms and data types. http://www.nextbio.com |
| NGS Catalog a continually updated database that collects, curates and manages available human Next Generation Sequencing (NGS) data obtained from published literature. http://bioinfo.mc.vanderbilt.edu/NGS |
| NHGRI Catalog of Genome-Wide Association Studies A Catalog of Published Genome-Wide Association Studies. http://www.genome.gov/26525384 |
| NLM The National Library of Medicine's. Every significant program of the Library is represented, from medical history to biotechnology. http://www.nlm.nih.gov |
| Nomenclature for the description of sequence variations Nomenclature system has been suggested for the description of sequence variants (mutations, polymorphisms) in DNA and protein sequences. http://www.genomic.unimelb.edu.au/mdi/mutnomen/ |
| Nomenclature for the description of sequence variations: discussions ... http://www.genomic.unimelb.edu.au/mdi/mutnomen/disc.html |
| NovoSeek Search engine for biomedical literature in Medline, US Grants and Full Text publications.. http://www.novoseek.com |
| Nuclear Protein Database The NPD contains information on >1000 vertebrate proteins (mainly those from mouse and human) that are localised to the cell nucleus. Where known, the sub-nuclear compartment where the proteins have been found are reported. Also stored is information on the amino acid sequence, predicted protein size and isoelectric point, as well as any repeats, motifs or domains within the protein sequence. http://npd.hgu.mrc.ac.uk |
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| Online Mendelian Inheritance in Man (OMIM) Online Mendelian Inheritance in Man (OMIM(TM)). This database is a catalog of human genes and genetic disorders authored at Johns Hopkins and elsewhere, and developed for the World Wide Web by NCBI, the National Center for Biotechnology Information. The database contains textual information, pictures, and reference information. It also contains copious links to NCBI's Entrez database of MEDLINE articles and sequence information. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM&tool=toolbar |
| ORNL Computational Biosciences The ORNL Computational Biosciences Section is particularly interested in the computational, informational, and biological opportunities and challenges created by the increasing flow of genes and proteins identified by large-scale genome sequencing. Addressing these problems appropriately could have important implications for understanding genomes and proteomes and fundamental biological processes. Research interests include Computational Analysis of the Structure and Function of Genes and Gene Products, Annotation of Genome Sequences, Protein Folding and Structure Prediction, Microbial Genomics and Environmental Biotechnology, Integrated Analysis Tools and Databases that Support Fundamental Biological Research. http://compbio.ornl.gov/ |
| Oxford Molecular Oxford Molecular Group is a leading worldwide supplier of integrated molecular design software and collaborative research services. The company's integrated products unite bioinformatics and computer-aided chemistry with proven computer-aided molecular design techniques. This approach provides a mechanism to share information efficiently at all stages of the drug design process, from genetic engineering to medicinal chemistry. http://www.oxmol.co.uk/ |
| Oxford University Press (OUP) Oxford University Press (OUP) is the world's largest university press, publishing over 4,000 new titles a year. It has become familiar to millions through a diverse publishing programme that includes scholarly works in all academic disciplines, bibles, music, school and college textbooks, children's books, materials for teaching English as a foreign language, business books, dictionaries and reference books, and journals. http://www.oup.co.uk/ |
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| Pedro's BioMolecular Research Tools ( USA) A Collection of WWW Links to Information and Services Useful to Molecular Biologists. http://www.public.iastate.edu/~pedro/research_tools.html |
| Pedro's BioMolecular Research Tools (Germany) A Collection of WWW Links to Information and Services Useful to Molecular Biologists. http://www.biophys.uni-duesseldorf.de/BioNet/Pedro/research_tools.html |
| PESX Find putative exonic splicing enhancers and silencers. http://cubweb.biology.columbia.edu/pesx/ |
| PheGenI (NCBI) Phenotype Genotype Integrator (PheGenI) permits researchers to view a tabular display of genome-wide association study results for DNA sequence variations, genes and gene expression differences for a given trait. The results are linked to their source databases where researchers can then dig deeper into the detailed data. PheGenI also includes graphical displays by chromosome (ideogram) and a DNA sequence viewer that shows the relationships between genetic variants in the human genome at the nucleotide level. http://www.ncbi.nlm.nih.gov/gap/PheGenI |
| Pierce Chemical Company ... http://www.piercenet.com/ |
| Pilot European Image Processing Archive (PEIPA) The Pilot European Image Processing Archive (PEIPA). http://peipa.essex.ac.uk/ |
| PowerMarker PowerMarker is a comprehensive set of statistical methods for genetic marker data analysis, designed especially for SSR/SNP data analysis. http://statgen.ncsu.edu/powermarker/ |
| Primer3 Online primer development tool. http://frodo.wi.mit.edu/ |
| Prosite Database of protein families and domains. http://www.expasy.ch/prosite/ |
| Protein Data Bank Protein Data Bank (PDB) is the single worldwide repository for the processing and distribution of 3-D biological macromolecular structure data. http://www.rcsb.org/pdb/ |
| Protein Information Resource (PIR) The Protein Information Resource (PIR), in collaboration with the Munich Information Center for Protein Sequences (MIPS) and the Japanese International Protein Sequence Database (JIPID) maintains the PIR-International Protein Sequence Database, a comprehensive, annotated, and non-redundant set of protein sequence databases in which entries are classified into family groups and alignments of each group are available. http://pir.georgetown.edu/ |
| Protein Sequence Analysis (PSA) The PSA Protein Sequence Analysis (PSA) server predicts probable secondary structures and folding classes for a given amino acid sequence. http://bmerc-www.bu.edu/psa/ |
| Proteome Databases The BioKnowledge Library consists of 4 component volumes, covering the species, Homo Sapiens (HumanPSD), Caenorhabditis elegans (WormPD), Saccharomyces cerevisiae (YPD) and Schizosaccharomyces pombe (PombePD). http://www.biobase-international.com/pages/index.php?id=38 |
| Protocols NWFSC Molecular Biology Protocols. http://listeria.nwfsc.noaa.gov/protocols.html |
| PubCrawler PubCrawler is a free alerting service that scans daily updates to the NCBI Medline (PubMed) and GenBank databases. PubCrawler can keep scientists informed of the current contents of Medline and GenBank, by listing new database entries that match their research interests. http://pubcrawler.gen.tcd.ie/ |
| PubMed (NCBI) PubMed is the National Library of Medicine's search service that provides access to over 10 million citations in MEDLINE, PreMEDLINE, and other related databases, with links to participating online journals. http://www.ncbi.nlm.nih.gov/entrez/query.fcgi |
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| QuickMap Infoclone The program performing searches in CEPH/Généthon database is infoclone, part of QUICKMAP, a compact database and navigation tool for the physical map of the human genome. http://www.cephb.fr/bio/infoclone.html |
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| Rare Forms of Dementia Database The project aims to set up a database which will include the following information on rare forms of dementia: the disease name and synonyms, a description of the disorder along with its symptoms and causes, the epidemiological data available and treatment, information on clinical trials and diagnostic procedures and finally a list of sources for further information. http://www.alzheimer-europe.org/?lm1=D76EBF7F6AEA |
| Reference Manager Output Styles Repository The Reference Manager Styles Collection contains more than 900 bibliographic styles for a variety of disciplines. Any existing style can be modified, or you may create your own styles from scratch. http://www.refman.com/support/rmstyles.asp |
| RefSeq (NCBI) The NCBI Reference Sequence project (RefSeq) will provide reference sequence standards for the naturally occurring molecules of the central dogma, from chromosomes to mRNAs to proteins. RefSeq standards provide a foundation for the functional annotation of the human genome. They provide a stable reference point for mutation analysis, gene expression studies, and polymorphism discovery. Furthermore, the RefSeq-to-LocusLink associations anchor UniGene clusters and support annotation of genomic contig sequence data generated by the Human Genome Project. http://www.ncbi.nih.gov/RefSeq/ |
| RepeatMasker Web Server RepeatMasker screens DNA sequences in fasta format against a library of repetitive elements and returns a masked query sequence ready for database searches as well as a table annotating the masked regions. http://www.repeatmasker.org |
| RESCUE-ESE An online tool for identifying candidate exonic splicing enhancers (ESEs) in vertebrate exons. http://genes.mit.edu/burgelab/rescue-ese/ |
| Research Genetics (ResGen) Research Genetics (ResGen) is a market leader in developing, manufacturing and marketing products for life sciences research. The Company's products and services simplify and improve gene mapping, gene expression analysis and other genetic techniques that underlie functional genomics and gene base drug discovery. http://www.resgen.com/ |
| Resource Center of the German Human Genome Project (RZPD) The Resource Center of the German Human Genome Project (RZPD) is a non-profit service facility for research groups working in the fields of medicine, biology and biochemistry. With their products, services and our bioinformatic tools they provide support for biomedical basic research aiming at the improvement of health and quality of life for man. RZPD has one of the most comprehensive collections of genomic and cDNA gene libraries of man as well as of selected model organisms worldwide and offers its customers a wide product range for the libraries in question. http://www.rzpd.de/ |
| Restriction Enzyme database (REBASE) REBASE, the Restriction Enzyme database is a collection of information about restriction enzymes, methylases, the microorganisms from which they have been isolated, recognition sequences, cleavage sites, methylation specificity, the commercial availability of the enzymes, and references - both published and unpublished observations (dating back to 1952). REBASE is updated daily. http://rebase.neb.com/rebase/rebase.html |
| RNAdb This database is a comprehensive mammalian noncoding RNA database (RNAdb) containing sequences and annotations for tens of thousands of noncoding RNAs. These include a wide range of microRNAs, small nucleolar RNAs and larger mRNA-like ncRNAs. Some of these have documented functions and/or expression patterns, but the majority remains of unclear significance. http://jsm-research.imb.uq.edu.au/rnadb |
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| SAGE KE SAGE KE brings together the best of the myriad scientific disciplines dealing with aging. Anyone involved in the science of aging or related fields will find this resource invaluable.. http://sageke.sciencemag.org |
| Salamon's Neuroanatomy and Neurovasculature Web-Atlas Anatomy and Neuroimaging of the Brain, Vessels of the Brain, Diffusion Tensor Imaging (DTI). http://www.radnet.ucla.edu/sections/DINR |
| Sanger Center The Sanger Centre is a genome research centre founded by the Wellcome Trust and the Medical Research Council. Their purpose is to further the knowledge of genomes, particularly through large scale sequencing and analysis. http://www.sanger.ac.uk/ |
| Science Carreers ScienceCareers.org is dedicated to being the world leader in matching qualified scientists with jobs in industry, academia and government.. http://sciencecareers.sciencemag.org/ |
| Science Functional Genomics Website Science magazine offers a new resource that provides an entry point for scientists, students, educators, and the publicthe Science Functional Genomics website. Among the sites offerings: Links to breaking news in genomics and biotech, from Science, ScienceNOW, and selected other sources, pointers to classic papers, reviews, and new research, organized by categories relevant to the postgenomic world, a page devoted to Sciences genome special issues, collections of web resources in genomics and postgenomics, including special pages on model organisms, educational resources, and genome maps and a special node of news, information, and links on the biotech industry. http://www.sciencemag.org/feature/plus/sfg/ |
| Scirus Responding to the need for focused, comprehensive and reliable overviews of relevant scientific information, Elsevier Science has developed the powerful Internet search tool Scirus. Scirus distinguishes itself from existing search engines by concentrating on scientific content only and by searching both Web and membership sources. It enables scientists, students and anyone searching for scientific information to chart and pinpoint data, locate university sites, and find reports and articles in a clutter-free, user-friendly and efficient manner. http://www.scirus.com/ |
| Scopus Scopus is a unique new navigational product for all science from Elsevier. Apart from being the world's biggest abstract database covering 25 million abstracts from over 14,000 titles across 4,000 publishers, Scopus also offers powerful and innovative searching and browsing tools.. http://www.scopus.com |
| Search Engines This documents collects some of the most useful search engines available on the WWW. http://cuiwww.unige.ch/meta-index.html |
| SelectScience SelectScience is an independent resource for laboratory professionals from all disciplines. It gives scientists their suppliers' product information, other visitors' product experiences and the option to post their own. http://www.selectscience.net/ |
| Sequence Retrieval System (SRS-WWW) (EMBL) SRSWWW is a World Wide Web interface to the Sequence Retrieval System (SRS). Compared with other SRS interfaces SRSWWW has more users because of the widespread use of web browsers, its easiness to handle and its user friendly interface. http://www.embl-heidelberg.de/srs5/ |
| Sequence Retrieval System (SRSWWW) (ExPASy) SRSWWW is a World Wide Web interface to the Sequence Retrieval System (SRS). Compared with other SRS interfaces SRSWWW has more users because of the widespread use of web browsers, its easiness to handle and its user friendly interface. http://www.expasy.org/srs5/ |
| SGD SGDTM is a scientific database of the molecular biology and genetics of the yeast Saccharomyces cerevisiae, which is commonly known as baker's or budding yeast.. http://www.yeastgenome.org/ |
| SHGC (Stanford Human Genome Center) The two primary research goals of the Stanford Human Genome Center (SHGC) are the construction of high resolution Radiation Hybrid maps of the human genome and the sequencing of large, contiguous genomic regions. The SHGC also maintains an active Education Program to make our research available to students, teachers and the community. http://shgc-www.stanford.edu/ |
| SIFT - Sorting Intolerant From Tolerant SIFT will return predictions for what amino acid substitutions will affect protein function. http://sift.jcvi.org |
| Sigma-Aldrich ... http://www.sigmaaldrich.com/ |
| Signal Transduction Knowledge Environment (STKE) Science's STKE, should be useful to the scientists who specialize in ST as well as the many scientists who need to follow and apply the current findings of this field even though their primary interest may not be in ST mechanisms themselves. http://stke.sciencemag.org/ |
| Simple Modular Architecture Research Tool (SMART) SMART (a Simple Modular Architecture Research Tool) allows the identification and annotation of genetically mobile domains and the analysis of domain architectures. More than 500 domain families found in signalling, extracellular and chromatin-associated proteins are detectable. These domains are extensively annotated with respect to phyletic distributions, functional class, tertiary structures and functionally important residues. Each domain found in a non-redundant protein database as well as search parameters and taxonomic information are stored in a relational database system. User interfaces to this database allow searches for proteins containing specific combinations of domains in defined taxa. http://smart.embl-heidelberg.de/ |
| Simple Interactive Statistical Analysis (SISA) SISA allows you to do statistical analysis directly on the Internet. It includes user friendly guides to statistical procedures to see what procedure is appropriate for your problem. http://home.clara.net/sisa |
| Society for Neuroscience The Society for Neuroscience (SFN) is a nonprofit membership organization of basic scientists and physicians who study the brain and nervous system. Neuroscience includes the study of brain development, sensation and perception, learning and memory, movement, sleep, stress, aging and neurological and psychiatric disorders. It also includes the molecules, cells and genes responsible for nervous system functioning. http://web.sfn.org |
| Stanford Genomic Resources Stanford Genomic Resources provides links to various systematic analysis projects, resources, laboratories, and departments at Stanford University. It is maintained by the Saccharomyces Genome Database within the School of Medicine. http://genome-www.stanford.edu/ |
| Stichting Alzheimer Onderzoek (SAO) De Internationale Stichting Alzheimer Onderzoek (ISAO) is een non-profit organisatie die tot doel heeft wetenschappelijk onderzoek naar de oorzaken van en de behandelingsmethoden voor de ziekte van Alzheimer te ondersteunen en voorlichting te geven over de ziekte.. http://www.alzh.org |
| Stratagene ... http://www.stratagene.com |
| STRING STRING is a database of known and predicted protein interactions. The interactions include direct (physical) and indirect (functional) associations. http://string.embl.de |
| SuperArray SuperArray is a biotechnology company committed to provide biomedical researchers with high quality and easy-to-use nucleic acid array systems. The gene expression array systems are designed for pathway-specific gene expression profiling. In addition to the standard pathway-specific and pathway-finder arrays, they also offer custom designed arrays specifically for your purposes. http://www.superarray.com/ |
| SWAN Alzheimer Knowledge Base Semantic Web Applications in Neuromedicine (SWAN) Alzheimer Knowledge Base. http://hypothesis.alzforum.org/swan |
| SWsrch search Service SWsrch is a homology search service by using The Paracel BioView Toolkit software and GeneMatcher hardware. This page is to submit the e-mail homology search by using the SWsrch based on Smith-Waterman full dynamic algorithm. You can get your search result at your e-mail address. http://www.dna.affrc.go.jp/swsrch/ |
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| Tag 'n' Tell Given an input list of genetic markers and the haplotypes that exist for those markers, Tag'n'Tell identifies convenient marker subsets that uniquely characterize (or 'tag') chosen haplotypes. The minimum number of 'tag' markers required for haplotype distinction may be determined by this tool. http://snp.cgb.ki.se/tagntell/ |
| TarBase TarBase is database of experimentally supported miRNA target interactions. http://diana.cslab.ece.ntua.gr/tarbase |
| Taxonomy Browser The NCBI taxonomy database contains the names of all organisms that are represented in the genetic databases with at least one nucleotide or protein sequence. http://www.ncbi.nlm.nih.gov/Taxonomy/tax.html/ |
| The 1000 Genomes Browser Ensembl-based browser providing early access to 1000genomes data. http://browser.1000genomes.org |
| The Fugu Informatics Network The UK MRC funds the Comparative Genomics Group at the School of Biological & Chemical Sciences, QMUL. The group, headed by Greg Elgar, is involved in a number of projects geared towards understanding sequence data generated by the human genome project. Fugu rubripes (the Japanese puffer fish) is particularly suited to this kind of analysis. http://fugu.biology.qmul.ac.uk/ |
| TheScientificWorld TheScientificWorld is your personal portal to science. We connect you to essential scientific research information of critical interest to you. Each day, at your request, we electronically deliver new information to you profiled to your exact requirements. We help you to connect with your peers. Starting shortly, we will optimize your online procurement of scientific equipment, chemicals and biological resources and provide you with the latest scientific research tools. Designed for science professionals, TheScientificWorld currently provides the world's scientific research information as single articles without the need for journal subscription. We deliver leading-edge scientific business and world news. We alert each of our Members to future scientific and business events of specific interest to them. TheScientificWorld will enable you to procure scientific equipment, chemicals and biological resources online. Our i-Publish service will provide scientists with a revolutionary forum for the immediate global dissemination of their peer-reviewed scientific research findings. http://www.thescientificworld.com |
| ToppGene Suite A one-stop portal for gene list enrichment analysis and candidate gene prioritization based on functional annotations and protein interactions network. http://toppgene.cchmc.org |
| Transcription Element Search System The Transcription Element Search System (TESS) is a web tool for predicting transcription factor binding sites in DNA sequences. It can identify binding sites using site or consensus strings and positional weight matrices from the TRANSFAC, IMD, and our CBIL-GibbsMat database. http://www.cbil.upenn.edu/cgi-bin/tess/tess |
| TransFac Database The TRANSFAC database compiles data about gene regulatory DNA sequences and protein factors binding to and acting through them. On this basis, programs are developed that help to identify putative promoter or enhancer structures and to suggest their features. http://www.gene-regulation.com/pub/databases.html |
| Travlang's Translating Dictionaries Travlang's Translating Dictionaries. Travlang is proud to offer many on-line translating dictionaries. http://dictionaries.travlang.com/ |
| Tree of Life The Tree of Life is a project containing information about the diversity of organisms on Earth, their history, and characteristics. The information is linked together in the form of the evolutionary tree that connects all organisms to each other. http://phylogeny.arizona.edu/tree/phylogeny.html |
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| UA - DOCOP Doctoraat en Doctoraatsopleiding. http://www.ua.ac.be/main.aspx?c=*DOCOP&n=34158 |
| UA - Biomedical Sciences Department Verslagen departementsraad, beurzen, cursussen, prijzen, ... http://www.ua.ac.be/main.aspx?c=*BMW1&n=8130 |
| UA - Damolces Damocles is een uitgave van de diensten Onderzoeksbeleid van de Universiteit Antwerpen en verschijnt in principe maandelijks. De bedoeling van deze uitgave is om recente onderzoeksinformatie te bundelen en bekendheid te geven binnen de onderzoeksgemeenschap van de drie Antwerpse campussen. De onderzoekers worden op deze manier op de hoogte gebracht van de verschillende binnen- en buitenlandse oproepen tot het indienen van projectvoorstellen, beurzen, prijzen, informatie over onderzoeksvalorisatie en andere onderzoeksaangelegenheden (zoals de beknopte verslagen van de onderzoeksraden, toegekende mandaten, etc.). http://www.ua.ac.be/main.asp?c=ONDERZK&n=72&ct=OZ00001 |
| UA - Directory Service UA Directory Service. http://www.uia.ac.be/ds/ua_query.html |
| UA - Libraries Bibliotheken van de Universiteit Antwerpen. Via deze pagina's vindt u alle informatie die de bibliotheken via het WWW aanbieden, alsook enkele interessante verwijzingen naar bronnen op het internet. De UA-bibliotheken zijn één van de stichtende partners van Anet, het Antwerpse bibliotheeknetwerk. http://lib.ua.ac.be/ |
| UA - WebSpirs The ERL database server of the University of Antwerp Libraries. This page provides web access to the UA libraries ERL databases. Access is restricted to UA computer networks only. http://web5.silverplatter.com/webspirs/start.ws?language=en&customer=univantspirs |
| UA Blackboard Learning and Community Portal System e-Education platform, designed to transform the Internet into a powerful environment for the educational experience. http://blackboard.ua.ac.be/ |
| Uanet Binnen het departement ICT, afdeling Infrastructuur en Communicatie, heeft UAnet als opdracht een performante basis-netwerk-infrastructuur ter beschikking te stellen.. http://www.uanet.ua.ac.be/ |
| UCSC Genome Browser The UCSC Genome Browser contains the reference sequence and working draft assemblies for a large collection of genomes. It also provides a portal to the ENCODE project.. http://genome.ucsc.edu |
| UIA - Helpdesk Teneinde tegemoet te kunnen komen aan de steeds grotere behoefte aan gebruikers- ondersteuning op de UIA, is er beslist om een helpdesk op te richten. http://www.ua.ac.be/main.aspx?c=*DEPICT&n=18057 |
| Unified Database (UDB) The Unified Database (UDB) presents an integrated map for each human chromosome, based on data integrated from various radiation hybrid, linkage and physical mapping resources. The integrated map currently includes genes, STSs and EST clusters, with further links to the Genome Database, GeneCards and UniGene. http://bioinformatics.weizmann.ac.il/udb/ |
| Unigene (NCBI) UniGene is an experimental system for automatically partitioning GenBank sequences into a non-redundant set of gene-oriented clusters. Each UniGene cluster contains sequences that represent a unique gene, as well as related information such as the tissue types in which the gene has been expressed and map location. In addition to sequences of well-characterized genes, hundreds of thousands novel expressed sequence tag (EST) sequences have been included. . http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=unigene |
| UniHI: Unified Human Interactome Unified Human Interactome is a comprehensive database of the computational and experimental based human protein interaction networks. This database is aimed to integrate diverge maps, which offers the research a flexible and direct entry gate into the human interactome. http://www.mdc-berlin.de/unihi |
| UniPROBE The Universal PBM Resource for Oligonucleotide Binding Evaluation database hosts data generated by universal protein binding microarray (PBM) technology on the in vitro DNA binding specificities of proteins. http://thebrain.bwh.harvard.edu/uniprobe |
| United States Patent and Trademark Office (USPTO) The basic role of the Patent and Trademark Office (PTO) is to promote the progress of science and the useful arts by securing for limited times to inventors the exclusive right to their respective discoveries. http://www.uspto.gov |
| Universitair Ziekenhuis Antwerpen ... http://www.uza.be/ |
| Universiteit Antwerpen ... http://www.ua.ac.be/ |
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| Vector DB Vector DB contains annotations and sequence information for many vectors commonly used in molecular biology. Information for more than 2600 vectors is available with search facilities. http://seq.yeastgenome.org/vectordb/ |
| VIB The Flanders Interuniversity Institute for Biotechnology (VIB)is an autonomous biotech research institute, founded in 1995 by the Government of Flanders. VIB combines 9 university departments and 5 associated laboratories. More than 700 researchers and technicians are active within various areas of biotech research. VIB has 3 major objectives: to perform high quality research, to validate research results and technology and to stimulate a well-structured social dialogue on biotechnology. http://www.vib.be/ |
| VIB Genetic Service Facility The VIB Genetic Service Facility is dedicated to flexible sequencing and genotyping services for human and agricultural applications. http://www.vibgeneticservicefacility.be |
| VIB MicroArray Facility (MAF) The purpose of the facility is to provide VIB researchers access to a full service, including: production of cDNA arrays, RNA labeling, hybridization, and data analysis. http://www.microarrays.be/ |
| VIB Proteomics Core Facility The VIB Proteomics Core Facility masters state-of-the-art equipment for protein identification, which is available for your research on a fee-for-service basis. Economy of scale discounts can be provided for large-scale proteomics projects. http://www.vibproteomicscorefacility.be |
| Virtual Genome Center (VGC) The Virtual Genome Center is a place where molecular biologists can access tools and databases to do their work. The VGC has no director, staff, grant support, or corporate sponsors. It simply exists. http://alces.med.umn.edu/VGC.html |
| VISTA - Visualization Tools For Alignment VISTA is a set of tools for comparative genomics. It was designed to visualize long sequence alignments of DNA from two or more species with annotation information.. http://www-gsd.lbl.gov/vista/ |
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| Washington University Institute for Biomedical Computing Our mission is to advance biology and medicine through the development of novel computational methods, and where necessary hardware. We are dedicated to the solution of challenging problems with a multidisciplinary approach. Current activities include molecular sequence and genome analysis, biochemical databases and information retrieval, molecular design and computational biophysics, real time 3-D microscopy, wide field computational optical sectioning microscopy, and model based quantitative image restoration. http://www.ibc.wustl.edu/ |
| WAVe WAVe is a human variome integration application, focused on providing unified and enriched access to public locus-specific databases and genomic variation datasets. . http://bioinformatics.ua.pt/WAVe |
| Web of Science The ISI Web of Science citations database. http://portal.isiknowledge.com/portal.cgi?DestApp=WOS&Func=Frame |
| Webcutter Webcutter is a free on-line tool to help restriction map nucleotide sequences. http://www.ccsi.com/firstmarket/cutter/ |
| WebPath - The Internet Pathology Laboratory for Medical Education This electronic resource includes over 1900 images along with text, tutorials, laboratory exercises, and examination items for self-assessment that demonstrate gross and microscopic pathologic findings associated with human disease conditions. http://www-medlib.med.utah.edu/WebPath/webpath.html |
| Westburg Since 1984, Westburg has focused on outstanding products and services for molecular biological research and diagnostics. Over the years, we have established ourselves as an essential link between institutes and companies on the one hand and manufacturers on the other. Being an independent supplier, WESTBURG offers her customers a selection of products, based on quality, applicability and innovative advantages. In addition, our specific know-how and experience enables us to provide you with outstanding service and support. http://www.westburg.nl/ |
| Wetenschappelijke Koerier De Wetenschappelijke Koerier krijgt als communicatie-instrument binnen de medische wereld van de Antwerpse regio meer en meer zijn plaats. Het blijkt ook een nuttig informatiekanaal te zijn, gericht naar navormingsaktiviteiten. http://webh01.ua.ac.be/koerier/ |
| Whitehead STS-based map of the Human Genome The twelfth and final data release from the Human Physical Mapping Project at the Whitehead Institute/MIT Genome Center, covering data generated through the end of July 1997. This data corresponds to the integrated maps announced in Science 270, number 5244 (22 December 1995), with supplemental mapping information. Please see the paper for a detailed description of the materials and methods used to construct these maps. http://carbon.wi.mit.edu/cgi-bin/contig/phys_map |
| Whole Brain Atlas An incredible collection of MR images of the brain. A well designed and easy to use web site that includes 'Tours' of pathological conditions as well as MPEG movies. Also offers a self-quiz on anatomical structures. The on-line atlas has sections on normal brain, cerebrovascular disease, neoplastic disease, degenerative disease, and inflammatory/infectious disease. http://www.med.harvard.edu:80/AANLIB/home.html |
| WIS Department of Biological Services Weizmann Institute of Science, Department of Biological Services and Crown Human Genome Center hosting Bioinformatics and Biological Computing. Hosting International Center for Cooperation in Bioinformatics network Israeli National Node of the European Molecular Biology network Israel National Laboratory for Genome Infrastructure. http://bip.weizmann.ac.il/index.html |
| Wisdom Sources of Biomedical Research Funding This database contains descriptions of over 400 funding schemes offered by 100+ UK organizations supporting biomedical research. Information includes the type and purpose of the award, the amount of funding available and full application procedure, including contact details. It also provides background information on funding policy, total annual expenditure on biomedical research and publications for each funding body. . http://wisdom.wellcome.ac.uk/wisdom/fundhome.html |
| World PersonalGenome Registry The World Personal Genome Registry is a website created by Illumina for the individual genome sequencing space that allows the community to keep track of the current status of personal whole-genome sequencing. http://www.worldpgr.com |
| WWW Virtual Library: Cell biology A Guide to Cell Biology on the Web. http://vl.bwh.harvard.edu/ |
| WWW Virtual Library: Genetics The VL is the oldest catalog of the web, started by Tim Berners-Lee, the creator of html and the web itself. Unlike commercial catalogs, it is run by a loose confederation of volunteers, who compile pages of key links for particular areas in which they are expert; even though it isn't the biggest index of the web, the VL pages are widely recognised as being amongst the highest-quality guides to particular sections of the web. http://www.ornl.gov/TechResources/Human_Genome/genetics.html |
| WWW Virtual Library: Science Science Catalog. http://vlib.org/Science.html |
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| Yahoo ... http://www.yahoo.com/ |
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| ZFIN (Zebrafish Model Organism Database) ZFIN serves as the zebrafish model organism database. The long term goals for ZFIN are a) to be the community database resource for the laboratory use of zebrafish, b) to develop and support integrated zebrafish genetic, genomic and developmental information, c) to maintain the definitive reference data sets of zebrafish research information, d) to link this information extensively to corresponding data in other model organism and human databases, e) to facilitate the use of zebrafish as a model for human biology and f) to serve the needs of the research community. http://zfin.org |